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What proportion of top-shelf subscription journal articles end up in PMC?

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In searching PMC recently, I was finding significant numbers of articles deposited from very notable journals, the outcome of  results from NIH funded research.  What proportion of annual research articles from any one journal end up on PMC? Because the NIH Open Access Policy gives authors at least 12 months to comply and deposit, I thought to explore articles from the year 2009, because we are now well beyond the 12 month deposit requirement, even for articles published in late 2009.  Here are my findings:

PMC Deposits as a Percentage of 2009 Article Publishing in Select Journals

JOURNAL 2009 Articles (SCImago) 2009 PMC Articles PMC Percentage (%)
Nature Genetics 282 117 41%
New England Journal of Medicine 1817 81 4%
Trends in Molecular Medicine 60 11 18%
Journal of Clinical Oncology 1290 288 22%
JAMA 1297 78 6%
Cancer Research 1250 577 46%
Circulation 1073 329 31%
Diabetes 388 371 96%
Lancet, The 1729 49 3%
Gastroenterology 760 121 16%

Some publishers help authors by handling the deposit.  Some don’t.   The percentages are so small for NEJM and JAMA that one has to wonder whether there is a culture of non-compliance by certain journals.  Contrast this mixed bag of compliance with the 1180 journals (as of August 12, 2011) that actively collaborate with the NCBI to  make the final published version of all NIH-funded articles available in PMC no later than 12 months after publication, not leaving anything to chance.  Actually, the Journal of Clinical Oncology and Diabetes are in this group of public access collaborators.

Read some comments collected by SPARC on the 3rd anniversary of the NIH public access policy.

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Thu, August 18 2011 » Uncategorized

3 Responses

  1. T Scott August 19 2011 @ 11:22

    Wouldn’t you need to know what percentage of articles in NEJM or JAMA are the result of NIH funding before suggesting a “culture of non-compliance by certain journals”?

  2. Jason August 22 2011 @ 17:09

    To echo T Scott’s sentiment, NIH policy compliance is required of authors and institutions, not the journals. Both NEJM and JAMA allow authors to submit to PubMed Central if necessary, but it’s up to the authors to do it.

  3. T Scott September 30 2011 @ 11:10

    One more bit of follow-up on this. If you search Pubmed for all articles from NEJM in 2009, you get 1486. Only 112 of those are tagged as having been funded by NIH. If your 81 articles figure is correct, that gives NEJM a compliance rate of 72%.

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  1. Too much public-funded research still hidden « scienceradar September 26 2011 @ 06:26

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